Cluster: HRGMv2_4434_CGC22
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4434
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4434_74 | HRGMv2_4434_74_1 | 3 | 485 | - | 2.A.66.1.33 |
| TF | HRGMv2_4434_74 | HRGMv2_4434_74_2 | 606 | 1502 | + | HTH_1 |
| CAZyme | HRGMv2_4434_74 | HRGMv2_4434_74_3 | 1499 | 2329 | + | GH25 |
| pfam | HRGMv2_4434_74 | HRGMv2_4434_74_4 | 2475 | 2939 | - | DUF188 |
| TC | HRGMv2_4434_74 | HRGMv2_4434_74_5 | 2942 | 4330 | - | 2.A.66.1.28 |
Gene ID: HRGMv2_4434_74_1
Type: TC
Location: 3 - 485 (-)
Type: TC
Location: 3 - 485 (-)
Gene ID: HRGMv2_4434_74_2
Type: TF
Location: 606 - 1502 (+)
Type: TF
Location: 606 - 1502 (+)
Gene ID: HRGMv2_4434_74_3
Type: CAZyme
Location: 1499 - 2329 (+)
Type: CAZyme
Location: 1499 - 2329 (+)
Gene ID: HRGMv2_4434_74_4
Type: pfam
Location: 2475 - 2939 (-)
Type: pfam
Location: 2475 - 2939 (-)
Gene ID: HRGMv2_4434_74_5
Type: TC
Location: 2942 - 4330 (-)
Type: TC
Location: 2942 - 4330 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.