Cluster: HRGMv2_4434_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4434
- CGC Family ID: CGCFAM_00237
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4434_62 | HRGMv2_4434_62_6 | 5136 | 6203 | - | GH179 |
| pfam | HRGMv2_4434_62 | HRGMv2_4434_62_7 | 6234 | 7076 | - | AP_endonuc_2 |
| pfam | HRGMv2_4434_62 | HRGMv2_4434_62_8 | 7413 | 8249 | - | QRPTase_C | QRPTase_N |
| TC | HRGMv2_4434_62 | HRGMv2_4434_62_9 | 8301 | 9797 | - | 3.D.10.1.4 |
Gene ID: HRGMv2_4434_62_6
Type: CAZyme
Location: 5136 - 6203 (-)
Type: CAZyme
Location: 5136 - 6203 (-)
Gene ID: HRGMv2_4434_62_7
Type: pfam
Location: 6234 - 7076 (-)
Type: pfam
Location: 6234 - 7076 (-)
Gene ID: HRGMv2_4434_62_8
Type: pfam
Location: 7413 - 8249 (-)
Type: pfam
Location: 7413 - 8249 (-)
Gene ID: HRGMv2_4434_62_9
Type: TC
Location: 8301 - 9797 (-)
Type: TC
Location: 8301 - 9797 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.