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Cluster: HRGMv2_4434_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4434_2 HRGMv2_4434_2_8 7247 9232 - GH78
TC HRGMv2_4434_2 HRGMv2_4434_2_9 9600 12350 + 3.A.5.1.3
CAZyme HRGMv2_4434_2 HRGMv2_4434_2_10 12766 15876 - GH38
pfam HRGMv2_4434_2 HRGMv2_4434_2_11 16059 19067 - Gram_pos_anchor
TC HRGMv2_4434_2 HRGMv2_4434_2_12 19095 20063 - 3.A.1.1.25
TC HRGMv2_4434_2 HRGMv2_4434_2_13 20070 21020 - 3.A.1.1.11
pfam HRGMv2_4434_2 HRGMv2_4434_2_14 21041 23695 - DUF5696
pfam HRGMv2_4434_2 HRGMv2_4434_2_15 23744 25891 - NHL | Yip1
TC HRGMv2_4434_2 HRGMv2_4434_2_16 25911 26804 - 3.A.1.1.20
TC HRGMv2_4434_2 HRGMv2_4434_2_17 26851 27783 - 3.A.1.1.11
Gene ID: HRGMv2_4434_2_8
Type: CAZyme
Location: 7247 - 9232 (-)
Gene ID: HRGMv2_4434_2_9
Type: TC
Location: 9600 - 12350 (+)
Gene ID: HRGMv2_4434_2_10
Type: CAZyme
Location: 12766 - 15876 (-)
Gene ID: HRGMv2_4434_2_11
Type: pfam
Location: 16059 - 19067 (-)
Gene ID: HRGMv2_4434_2_12
Type: TC
Location: 19095 - 20063 (-)
Gene ID: HRGMv2_4434_2_13
Type: TC
Location: 20070 - 21020 (-)
Gene ID: HRGMv2_4434_2_14
Type: pfam
Location: 21041 - 23695 (-)
Gene ID: HRGMv2_4434_2_15
Type: pfam
Location: 23744 - 25891 (-)
Gene ID: HRGMv2_4434_2_16
Type: TC
Location: 25911 - 26804 (-)
Gene ID: HRGMv2_4434_2_17
Type: TC
Location: 26851 - 27783 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Acutalibacteraceae
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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