Cluster: HRGMv2_4434_CGC17
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4434
- CGC Family ID: CGCFAM_00155
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4434_46 | HRGMv2_4434_46_2 | 226 | 1221 | - | 3.A.1.1.11 |
| TC | HRGMv2_4434_46 | HRGMv2_4434_46_3 | 1235 | 2149 | - | 3.A.1.1.25 |
| pfam | HRGMv2_4434_46 | HRGMv2_4434_46_4 | 2146 | 4428 | - | DUF5696 |
| pfam | HRGMv2_4434_46 | HRGMv2_4434_46_5 | 4452 | 6593 | - | NHL | Yip1 |
| TC | HRGMv2_4434_46 | HRGMv2_4434_46_6 | 6629 | 7519 | - | 3.A.1.1.39 |
| TC | HRGMv2_4434_46 | HRGMv2_4434_46_7 | 7547 | 8485 | - | 3.A.1.1.36 |
| STP | HRGMv2_4434_46 | HRGMv2_4434_46_8 | 8505 | 11378 | - | SBP_bac_1 |
| CAZyme | HRGMv2_4434_46 | HRGMv2_4434_46_9 | 11409 | 12212 | - | GH16 |
Gene ID: HRGMv2_4434_46_2
Type: TC
Location: 226 - 1221 (-)
Type: TC
Location: 226 - 1221 (-)
Gene ID: HRGMv2_4434_46_3
Type: TC
Location: 1235 - 2149 (-)
Type: TC
Location: 1235 - 2149 (-)
Gene ID: HRGMv2_4434_46_4
Type: pfam
Location: 2146 - 4428 (-)
Type: pfam
Location: 2146 - 4428 (-)
Gene ID: HRGMv2_4434_46_5
Type: pfam
Location: 4452 - 6593 (-)
Type: pfam
Location: 4452 - 6593 (-)
Gene ID: HRGMv2_4434_46_6
Type: TC
Location: 6629 - 7519 (-)
Type: TC
Location: 6629 - 7519 (-)
Gene ID: HRGMv2_4434_46_7
Type: TC
Location: 7547 - 8485 (-)
Type: TC
Location: 7547 - 8485 (-)
Gene ID: HRGMv2_4434_46_8
Type: STP
Location: 8505 - 11378 (-)
Type: STP
Location: 8505 - 11378 (-)
Gene ID: HRGMv2_4434_46_9
Type: CAZyme
Location: 11409 - 12212 (-)
Type: CAZyme
Location: 11409 - 12212 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.