Cluster: HRGMv2_4434_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4434
- CGC Family ID: CGCFAM_00692
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4434_32 | HRGMv2_4434_32_9 | 10098 | 11543 | - | CBM66 |
| pfam | HRGMv2_4434_32 | HRGMv2_4434_32_10 | 11579 | 12505 | - | DHDPS |
| NULL(UNKNOWN) | HRGMv2_4434_32 | HRGMv2_4434_32_11 | 12580 | 18549 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4434_32 | HRGMv2_4434_32_12 | 18585 | 20426 | - | 3.A.1.1.10 |
| TC | HRGMv2_4434_32 | HRGMv2_4434_32_13 | 20513 | 21406 | - | 3.A.1.1.9 |
| TC | HRGMv2_4434_32 | HRGMv2_4434_32_14 | 21420 | 22379 | - | 3.A.1.1.9 |
Gene ID: HRGMv2_4434_32_9
Type: CAZyme
Location: 10098 - 11543 (-)
Type: CAZyme
Location: 10098 - 11543 (-)
Gene ID: HRGMv2_4434_32_10
Type: pfam
Location: 11579 - 12505 (-)
Type: pfam
Location: 11579 - 12505 (-)
Gene ID: HRGMv2_4434_32_11
Type:
Location: 12580 - 18549 (-)
Type:
Location: 12580 - 18549 (-)
Gene ID: HRGMv2_4434_32_12
Type: TC
Location: 18585 - 20426 (-)
Type: TC
Location: 18585 - 20426 (-)
Gene ID: HRGMv2_4434_32_13
Type: TC
Location: 20513 - 21406 (-)
Type: TC
Location: 20513 - 21406 (-)
Gene ID: HRGMv2_4434_32_14
Type: TC
Location: 21420 - 22379 (-)
Type: TC
Location: 21420 - 22379 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.