Cluster: HRGMv2_4434_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4434
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4434_1 | HRGMv2_4434_1_62 | 61210 | 62058 | + | 3.A.11.1.2 |
| pfam | HRGMv2_4434_1 | HRGMv2_4434_1_63 | 62146 | 63246 | + | ADH_zinc_N | ADH_N |
| TF | HRGMv2_4434_1 | HRGMv2_4434_1_64 | 63543 | 64118 | + | FMN_bind_2 |
| TC | HRGMv2_4434_1 | HRGMv2_4434_1_65 | 64115 | 65458 | + | 2.A.66.1.26 |
| TC | HRGMv2_4434_1 | HRGMv2_4434_1_66 | 65542 | 66963 | - | 2.A.66.1.25 |
| peptidase | HRGMv2_4434_1 | HRGMv2_4434_1_67 | 67084 | 68775 | - | M38.UNW |
| CAZyme | HRGMv2_4434_1 | HRGMv2_4434_1_68 | 68896 | 70515 | - | GH20 |
Gene ID: HRGMv2_4434_1_62
Type: TC
Location: 61210 - 62058 (+)
Type: TC
Location: 61210 - 62058 (+)
Gene ID: HRGMv2_4434_1_63
Type: pfam
Location: 62146 - 63246 (+)
Type: pfam
Location: 62146 - 63246 (+)
Gene ID: HRGMv2_4434_1_64
Type: TF
Location: 63543 - 64118 (+)
Type: TF
Location: 63543 - 64118 (+)
Gene ID: HRGMv2_4434_1_65
Type: TC
Location: 64115 - 65458 (+)
Type: TC
Location: 64115 - 65458 (+)
Gene ID: HRGMv2_4434_1_66
Type: TC
Location: 65542 - 66963 (-)
Type: TC
Location: 65542 - 66963 (-)
Gene ID: HRGMv2_4434_1_67
Type: peptidase
Location: 67084 - 68775 (-)
Type: peptidase
Location: 67084 - 68775 (-)
Gene ID: HRGMv2_4434_1_68
Type: CAZyme
Location: 68896 - 70515 (-)
Type: CAZyme
Location: 68896 - 70515 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.