dbCAN Logo

Cluster: HRGMv2_4433_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4433_22 HRGMv2_4433_22_9 6354 7622 + 2.A.25.1.4
TC HRGMv2_4433_22 HRGMv2_4433_22_10 7609 10098 + 3.A.3.2.21
CAZyme HRGMv2_4433_22 HRGMv2_4433_22_11 10228 11223 + CE2
STP HRGMv2_4433_22 HRGMv2_4433_22_12 11220 12425 + Aminotran_1_2
sulfatase HRGMv2_4433_22 HRGMv2_4433_22_13 12422 13222 + S1_4
TC HRGMv2_4433_22 HRGMv2_4433_22_14 13268 14182 + 3.A.1.105.3
TC HRGMv2_4433_22 HRGMv2_4433_22_15 14179 15036 + 3.A.1.130.1
Gene ID: HRGMv2_4433_22_9
Type: TC
Location: 6354 - 7622 (+)
Gene ID: HRGMv2_4433_22_10
Type: TC
Location: 7609 - 10098 (+)
Gene ID: HRGMv2_4433_22_11
Type: CAZyme
Location: 10228 - 11223 (+)
Gene ID: HRGMv2_4433_22_12
Type: STP
Location: 11220 - 12425 (+)
Gene ID: HRGMv2_4433_22_13
Type: sulfatase
Location: 12422 - 13222 (+)
Gene ID: HRGMv2_4433_22_14
Type: TC
Location: 13268 - 14182 (+)
Gene ID: HRGMv2_4433_22_15
Type: TC
Location: 14179 - 15036 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List