Cluster: HRGMv2_4432_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4432
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4432_8 | HRGMv2_4432_8_35 | 38088 | 39077 | + | 9.B.146.1.6 |
| TC | HRGMv2_4432_8 | HRGMv2_4432_8_36 | 39122 | 40336 | + | 2.A.103.1.3 |
| CAZyme | HRGMv2_4432_8 | HRGMv2_4432_8_37 | 40341 | 41471 | + | GT28 |
Gene ID: HRGMv2_4432_8_35
Type: TC
Location: 38088 - 39077 (+)
Type: TC
Location: 38088 - 39077 (+)
Gene ID: HRGMv2_4432_8_36
Type: TC
Location: 39122 - 40336 (+)
Type: TC
Location: 39122 - 40336 (+)
Gene ID: HRGMv2_4432_8_37
Type: CAZyme
Location: 40341 - 41471 (+)
Type: CAZyme
Location: 40341 - 41471 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pelethomonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4432_8_36 | vegetarian > vegan | 1.43602 | 0.00050 |
| HRGMv2_4432_8_37 | vegetarian > vegan | 1.79785 | 0.00050 |