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Cluster: HRGMv2_4432_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4432_8 HRGMv2_4432_8_11 10324 12114 - 3.A.1.5.1
TC HRGMv2_4432_8 HRGMv2_4432_8_12 12141 13304 - 3.A.18.1.1
CAZyme HRGMv2_4432_8 HRGMv2_4432_8_13 13568 15997 - GT35
CAZyme HRGMv2_4432_8 HRGMv2_4432_8_14 16077 17510 - GT5
pfam HRGMv2_4432_8 HRGMv2_4432_8_15 17648 18766 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_4432_8 HRGMv2_4432_8_16 18763 19971 - NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_4432_8 HRGMv2_4432_8_17 20010 22040 - CBM48 | GH13_9
Gene ID: HRGMv2_4432_8_11
Type: TC
Location: 10324 - 12114 (-)
Gene ID: HRGMv2_4432_8_12
Type: TC
Location: 12141 - 13304 (-)
Gene ID: HRGMv2_4432_8_13
Type: CAZyme
Location: 13568 - 15997 (-)
Gene ID: HRGMv2_4432_8_14
Type: CAZyme
Location: 16077 - 17510 (-)
Gene ID: HRGMv2_4432_8_15
Type: pfam
Location: 17648 - 18766 (-)
Gene ID: HRGMv2_4432_8_16
Type: pfam
Location: 18763 - 19971 (-)
Gene ID: HRGMv2_4432_8_17
Type: CAZyme
Location: 20010 - 22040 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Oscillospiraceae
→
Genus
Pelethomonas
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_4432_8_12 vegetarian > vegan 1.16321 0.00050
HRGMv2_4432_8_15 vegetarian > vegan 1.30720 0.00050

🧭 Explore Read Mapping of CGC

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