Cluster: HRGMv2_4432_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4432
- CGC Family ID: CGCFAM_01341
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4432_6 | HRGMv2_4432_6_28 | 28845 | 32129 | + | 3.A.17.1.1 |
| TF | HRGMv2_4432_6 | HRGMv2_4432_6_29 | 32408 | 33190 | - | HTH_6 |
| CAZyme | HRGMv2_4432_6 | HRGMv2_4432_6_30 | 33449 | 34771 | + | GH4 |
| pfam | HRGMv2_4432_6 | HRGMv2_4432_6_31 | 34768 | 35511 | + | YdjC |
| TC | HRGMv2_4432_6 | HRGMv2_4432_6_32 | 35512 | 36618 | + | 3.A.1.1.22 |
| TC | HRGMv2_4432_6 | HRGMv2_4432_6_33 | 36584 | 37714 | + | 3.A.1.1.25 |
| TC | HRGMv2_4432_6 | HRGMv2_4432_6_34 | 37716 | 38645 | + | 3.A.1.1.11 |
Gene ID: HRGMv2_4432_6_28
Type: TC
Location: 28845 - 32129 (+)
Type: TC
Location: 28845 - 32129 (+)
Gene ID: HRGMv2_4432_6_29
Type: TF
Location: 32408 - 33190 (-)
Type: TF
Location: 32408 - 33190 (-)
Gene ID: HRGMv2_4432_6_30
Type: CAZyme
Location: 33449 - 34771 (+)
Type: CAZyme
Location: 33449 - 34771 (+)
Gene ID: HRGMv2_4432_6_31
Type: pfam
Location: 34768 - 35511 (+)
Type: pfam
Location: 34768 - 35511 (+)
Gene ID: HRGMv2_4432_6_32
Type: TC
Location: 35512 - 36618 (+)
Type: TC
Location: 35512 - 36618 (+)
Gene ID: HRGMv2_4432_6_33
Type: TC
Location: 36584 - 37714 (+)
Type: TC
Location: 36584 - 37714 (+)
Gene ID: HRGMv2_4432_6_34
Type: TC
Location: 37716 - 38645 (+)
Type: TC
Location: 37716 - 38645 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pelethomonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.