Cluster: HRGMv2_4432_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4432
- CGC Family ID: CGCFAM_09473
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4432_5 | HRGMv2_4432_5_61 | 57889 | 59337 | - | 2.A.38.1.1 |
| TC | HRGMv2_4432_5 | HRGMv2_4432_5_62 | 59353 | 60714 | - | 2.A.38.1.1 |
| TC | HRGMv2_4432_5 | HRGMv2_4432_5_63 | 60730 | 61509 | - | 9.B.126.2.7 |
| pfam | HRGMv2_4432_5 | HRGMv2_4432_5_64 | 61737 | 62702 | - | 2-Hacid_dh | 2-Hacid_dh_C |
| CAZyme | HRGMv2_4432_5 | HRGMv2_4432_5_65 | 62953 | 63765 | - | CE4 |
Gene ID: HRGMv2_4432_5_61
Type: TC
Location: 57889 - 59337 (-)
Type: TC
Location: 57889 - 59337 (-)
Gene ID: HRGMv2_4432_5_62
Type: TC
Location: 59353 - 60714 (-)
Type: TC
Location: 59353 - 60714 (-)
Gene ID: HRGMv2_4432_5_63
Type: TC
Location: 60730 - 61509 (-)
Type: TC
Location: 60730 - 61509 (-)
Gene ID: HRGMv2_4432_5_64
Type: pfam
Location: 61737 - 62702 (-)
Type: pfam
Location: 61737 - 62702 (-)
Gene ID: HRGMv2_4432_5_65
Type: CAZyme
Location: 62953 - 63765 (-)
Type: CAZyme
Location: 62953 - 63765 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pelethomonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4432_5_62 | vegetarian > vegan | 1.97727 | 0.00050 |