Cluster: HRGMv2_4432_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4432
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4432_3 | HRGMv2_4432_3_78 | 88541 | 89224 | + | 2.A.78.1.1 |
| TC | HRGMv2_4432_3 | HRGMv2_4432_3_79 | 89224 | 89547 | + | 2.A.78.1.1 |
| pfam | HRGMv2_4432_3 | HRGMv2_4432_3_80 | 89623 | 90681 | - | Ala_racemase_N | D-ser_dehydrat |
| peptidase | HRGMv2_4432_3 | HRGMv2_4432_3_81 | 90700 | 91737 | - | P01.UPW |
| CAZyme | HRGMv2_4432_3 | HRGMv2_4432_3_82 | 91755 | 92501 | - | CE14 |
| TC | HRGMv2_4432_3 | HRGMv2_4432_3_83 | 92505 | 93851 | - | 2.A.2.3.4 |
Gene ID: HRGMv2_4432_3_78
Type: TC
Location: 88541 - 89224 (+)
Type: TC
Location: 88541 - 89224 (+)
Gene ID: HRGMv2_4432_3_79
Type: TC
Location: 89224 - 89547 (+)
Type: TC
Location: 89224 - 89547 (+)
Gene ID: HRGMv2_4432_3_80
Type: pfam
Location: 89623 - 90681 (-)
Type: pfam
Location: 89623 - 90681 (-)
Gene ID: HRGMv2_4432_3_81
Type: peptidase
Location: 90700 - 91737 (-)
Type: peptidase
Location: 90700 - 91737 (-)
Gene ID: HRGMv2_4432_3_82
Type: CAZyme
Location: 91755 - 92501 (-)
Type: CAZyme
Location: 91755 - 92501 (-)
Gene ID: HRGMv2_4432_3_83
Type: TC
Location: 92505 - 93851 (-)
Type: TC
Location: 92505 - 93851 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pelethomonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.