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Cluster: HRGMv2_4432_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4432_3 HRGMv2_4432_3_29 26569 28254 - 3.A.1.5.2
TC HRGMv2_4432_3 HRGMv2_4432_3_30 28284 29258 - 3.A.1.5.20
TC HRGMv2_4432_3 HRGMv2_4432_3_31 29258 30268 - 3.A.1.5.19
TC HRGMv2_4432_3 HRGMv2_4432_3_32 30276 31439 - 3.A.1.5.2
TC HRGMv2_4432_3 HRGMv2_4432_3_33 31455 32378 - 3.A.1.5.2
CAZyme HRGMv2_4432_3 HRGMv2_4432_3_34 32397 34793 - GH95
peptidase HRGMv2_4432_3 HRGMv2_4432_3_35 34826 36067 - M24.UPB
pfam HRGMv2_4432_3 HRGMv2_4432_3_36 36480 37499 + Radical_SAM | SPASM
CAZyme HRGMv2_4432_3 HRGMv2_4432_3_37 37747 40146 - GH95
Gene ID: HRGMv2_4432_3_29
Type: TC
Location: 26569 - 28254 (-)
Gene ID: HRGMv2_4432_3_30
Type: TC
Location: 28284 - 29258 (-)
Gene ID: HRGMv2_4432_3_31
Type: TC
Location: 29258 - 30268 (-)
Gene ID: HRGMv2_4432_3_32
Type: TC
Location: 30276 - 31439 (-)
Gene ID: HRGMv2_4432_3_33
Type: TC
Location: 31455 - 32378 (-)
Gene ID: HRGMv2_4432_3_34
Type: CAZyme
Location: 32397 - 34793 (-)
Gene ID: HRGMv2_4432_3_35
Type: peptidase
Location: 34826 - 36067 (-)
Gene ID: HRGMv2_4432_3_36
Type: pfam
Location: 36480 - 37499 (+)
Gene ID: HRGMv2_4432_3_37
Type: CAZyme
Location: 37747 - 40146 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Oscillospiraceae
→
Genus
Pelethomonas
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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