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Cluster: HRGMv2_4432_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4432_33 HRGMv2_4432_33_4 3140 4972 - GH13_4
TF HRGMv2_4432_33 HRGMv2_4432_33_5 5199 6056 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_4432_33 HRGMv2_4432_33_6 6091 8268 - GH36
TC HRGMv2_4432_33 HRGMv2_4432_33_7 8439 9278 - 3.A.1.1.34
TC HRGMv2_4432_33 HRGMv2_4432_33_8 9291 10187 - 3.A.1.1.11
TC HRGMv2_4432_33 HRGMv2_4432_33_9 10203 11483 - 3.A.1.1.44
pfam HRGMv2_4432_33 HRGMv2_4432_33_10 11959 12639 + DUF624
pfam HRGMv2_4432_33 HRGMv2_4432_33_11 12731 13057 + SCP2
TC HRGMv2_4432_33 HRGMv2_4432_33_12 13213 14103 - 2.A.115.1.1
Gene ID: HRGMv2_4432_33_4
Type: CAZyme
Location: 3140 - 4972 (-)
Gene ID: HRGMv2_4432_33_5
Type: TF
Location: 5199 - 6056 (+)
Gene ID: HRGMv2_4432_33_6
Type: CAZyme
Location: 6091 - 8268 (-)
Gene ID: HRGMv2_4432_33_7
Type: TC
Location: 8439 - 9278 (-)
Gene ID: HRGMv2_4432_33_8
Type: TC
Location: 9291 - 10187 (-)
Gene ID: HRGMv2_4432_33_9
Type: TC
Location: 10203 - 11483 (-)
Gene ID: HRGMv2_4432_33_10
Type: pfam
Location: 11959 - 12639 (+)
Gene ID: HRGMv2_4432_33_11
Type: pfam
Location: 12731 - 13057 (+)
Gene ID: HRGMv2_4432_33_12
Type: TC
Location: 13213 - 14103 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Oscillospiraceae
→
Genus
Pelethomonas
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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