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Cluster: HRGMv2_4432_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4432_26 HRGMv2_4432_26_9 9717 11141 + CBM50
sulfatase HRGMv2_4432_26 HRGMv2_4432_26_10 11355 13598 + S1_14
pfam HRGMv2_4432_26 HRGMv2_4432_26_11 13932 15236 + Bmp
TC HRGMv2_4432_26 HRGMv2_4432_26_12 15421 16974 + 3.A.1.2.12
TC HRGMv2_4432_26 HRGMv2_4432_26_13 16971 18077 + 3.A.1.2.10
pfam HRGMv2_4432_26 HRGMv2_4432_26_14 18074 19048 + BPD_transp_2
TC HRGMv2_4432_26 HRGMv2_4432_26_15 19130 20314 - 3.A.1.115.1
TC HRGMv2_4432_26 HRGMv2_4432_26_16 20311 21087 - 3.A.1.128.6
Gene ID: HRGMv2_4432_26_9
Type: CAZyme
Location: 9717 - 11141 (+)
Gene ID: HRGMv2_4432_26_10
Type: sulfatase
Location: 11355 - 13598 (+)
Gene ID: HRGMv2_4432_26_11
Type: pfam
Location: 13932 - 15236 (+)
Gene ID: HRGMv2_4432_26_12
Type: TC
Location: 15421 - 16974 (+)
Gene ID: HRGMv2_4432_26_13
Type: TC
Location: 16971 - 18077 (+)
Gene ID: HRGMv2_4432_26_14
Type: pfam
Location: 18074 - 19048 (+)
Gene ID: HRGMv2_4432_26_15
Type: TC
Location: 19130 - 20314 (-)
Gene ID: HRGMv2_4432_26_16
Type: TC
Location: 20311 - 21087 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Oscillospiraceae
→
Genus
Pelethomonas
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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