Cluster: HRGMv2_4432_CGC19
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4432
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4432_24 | HRGMv2_4432_24_3 | 1507 | 2733 | + | GH3 |
| pfam | HRGMv2_4432_24 | HRGMv2_4432_24_4 | 2816 | 3964 | + | tRNA-synt_2c | tRNA_SAD |
| TC | HRGMv2_4432_24 | HRGMv2_4432_24_5 | 4179 | 4544 | + | 1.E.14.1.1 |
| TC | HRGMv2_4432_24 | HRGMv2_4432_24_6 | 4537 | 5232 | + | 2.A.122.1.4 |
Gene ID: HRGMv2_4432_24_3
Type: CAZyme
Location: 1507 - 2733 (+)
Type: CAZyme
Location: 1507 - 2733 (+)
Gene ID: HRGMv2_4432_24_4
Type: pfam
Location: 2816 - 3964 (+)
Type: pfam
Location: 2816 - 3964 (+)
Gene ID: HRGMv2_4432_24_5
Type: TC
Location: 4179 - 4544 (+)
Type: TC
Location: 4179 - 4544 (+)
Gene ID: HRGMv2_4432_24_6
Type: TC
Location: 4537 - 5232 (+)
Type: TC
Location: 4537 - 5232 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pelethomonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4432_24_4 | vegetarian > vegan | 1.06408 | 0.00050 |