Cluster: HRGMv2_4432_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4432
- CGC Family ID: CGCFAM_00802
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4432_13 | HRGMv2_4432_13_35 | 38651 | 40303 | + | GH18 |
| TC | HRGMv2_4432_13 | HRGMv2_4432_13_36 | 40360 | 42183 | - | 3.A.16.1.2 |
| peptidase | HRGMv2_4432_13 | HRGMv2_4432_13_37 | 42364 | 43173 | + | S14.UPW |
| pfam | HRGMv2_4432_13 | HRGMv2_4432_13_38 | 43466 | 47038 | + | SMC_N | SMC_hinge | AAA_15 | AAA_23 |
| TC | HRGMv2_4432_13 | HRGMv2_4432_13_39 | 47114 | 47992 | + | 3.A.5.1.1 |
Gene ID: HRGMv2_4432_13_35
Type: CAZyme
Location: 38651 - 40303 (+)
Type: CAZyme
Location: 38651 - 40303 (+)
Gene ID: HRGMv2_4432_13_36
Type: TC
Location: 40360 - 42183 (-)
Type: TC
Location: 40360 - 42183 (-)
Gene ID: HRGMv2_4432_13_37
Type: peptidase
Location: 42364 - 43173 (+)
Type: peptidase
Location: 42364 - 43173 (+)
Gene ID: HRGMv2_4432_13_38
Type: pfam
Location: 43466 - 47038 (+)
Type: pfam
Location: 43466 - 47038 (+)
Gene ID: HRGMv2_4432_13_39
Type: TC
Location: 47114 - 47992 (+)
Type: TC
Location: 47114 - 47992 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pelethomonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.