Cluster: HRGMv2_4432_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4432
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4432_11 | HRGMv2_4432_11_3 | 3442 | 4728 | + | GH18 |
| TF | HRGMv2_4432_11 | HRGMv2_4432_11_4 | 5008 | 5460 | + | MarR |
| TC | HRGMv2_4432_11 | HRGMv2_4432_11_5 | 5457 | 7193 | + | 3.A.1.135.5 |
| TC | HRGMv2_4432_11 | HRGMv2_4432_11_6 | 7186 | 9066 | + | 3.A.1.135.5 |
Gene ID: HRGMv2_4432_11_3
Type: CAZyme
Location: 3442 - 4728 (+)
Type: CAZyme
Location: 3442 - 4728 (+)
Gene ID: HRGMv2_4432_11_4
Type: TF
Location: 5008 - 5460 (+)
Type: TF
Location: 5008 - 5460 (+)
Gene ID: HRGMv2_4432_11_5
Type: TC
Location: 5457 - 7193 (+)
Type: TC
Location: 5457 - 7193 (+)
Gene ID: HRGMv2_4432_11_6
Type: TC
Location: 7186 - 9066 (+)
Type: TC
Location: 7186 - 9066 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pelethomonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.