Cluster: HRGMv2_4432_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4432
- CGC Family ID: CGCFAM_10315
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4432_10 | HRGMv2_4432_10_80 | 60277 | 60984 | + | 9.B.169.2.2 |
| STP | HRGMv2_4432_10 | HRGMv2_4432_10_81 | 60991 | 61470 | + | NUDIX |
| pfam | HRGMv2_4432_10 | HRGMv2_4432_10_82 | 61467 | 61904 | + | 2-thiour_desulf |
| TC | HRGMv2_4432_10 | HRGMv2_4432_10_83 | 61969 | 63600 | - | 2.A.35.2.1 |
| CAZyme | HRGMv2_4432_10 | HRGMv2_4432_10_84 | 64129 | 66474 | + | GH36 |
Gene ID: HRGMv2_4432_10_80
Type: TC
Location: 60277 - 60984 (+)
Type: TC
Location: 60277 - 60984 (+)
Gene ID: HRGMv2_4432_10_81
Type: STP
Location: 60991 - 61470 (+)
Type: STP
Location: 60991 - 61470 (+)
Gene ID: HRGMv2_4432_10_82
Type: pfam
Location: 61467 - 61904 (+)
Type: pfam
Location: 61467 - 61904 (+)
Gene ID: HRGMv2_4432_10_83
Type: TC
Location: 61969 - 63600 (-)
Type: TC
Location: 61969 - 63600 (-)
Gene ID: HRGMv2_4432_10_84
Type: CAZyme
Location: 64129 - 66474 (+)
Type: CAZyme
Location: 64129 - 66474 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pelethomonas
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_4432_10_80 | vegetarian > vegan | 3.09857 | 0.00050 |