Cluster: HRGMv2_4431_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4431
- CGC Family ID: CGCFAM_00055
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4431_31 | HRGMv2_4431_31_20 | 23549 | 23947 | - | 9.B.154.1.2 |
| CAZyme | HRGMv2_4431_31 | HRGMv2_4431_31_21 | 24111 | 25076 | - | GT2 |
| CAZyme | HRGMv2_4431_31 | HRGMv2_4431_31_22 | 25093 | 26097 | - | GT2 |
| pfam | HRGMv2_4431_31 | HRGMv2_4431_31_23 | 26057 | 27196 | - | Epimerase_2 |
| CAZyme | HRGMv2_4431_31 | HRGMv2_4431_31_24 | 27685 | 28452 | - | GT32 |
| STP | HRGMv2_4431_31 | HRGMv2_4431_31_25 | 28449 | 30782 | - | Fer4 |
| TC | HRGMv2_4431_31 | HRGMv2_4431_31_26 | 30779 | 32074 | - | 3.A.1.103.5 |
Gene ID: HRGMv2_4431_31_20
Type: TC
Location: 23549 - 23947 (-)
Type: TC
Location: 23549 - 23947 (-)
Gene ID: HRGMv2_4431_31_21
Type: CAZyme
Location: 24111 - 25076 (-)
Type: CAZyme
Location: 24111 - 25076 (-)
Gene ID: HRGMv2_4431_31_22
Type: CAZyme
Location: 25093 - 26097 (-)
Type: CAZyme
Location: 25093 - 26097 (-)
Gene ID: HRGMv2_4431_31_23
Type: pfam
Location: 26057 - 27196 (-)
Type: pfam
Location: 26057 - 27196 (-)
Gene ID: HRGMv2_4431_31_24
Type: CAZyme
Location: 27685 - 28452 (-)
Type: CAZyme
Location: 27685 - 28452 (-)
Gene ID: HRGMv2_4431_31_25
Type: STP
Location: 28449 - 30782 (-)
Type: STP
Location: 28449 - 30782 (-)
Gene ID: HRGMv2_4431_31_26
Type: TC
Location: 30779 - 32074 (-)
Type: TC
Location: 30779 - 32074 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-272
Species
CAG-272 sp900556615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.