Cluster: HRGMv2_4431_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4431
- CGC Family ID: CGCFAM_00783
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4431_29 | HRGMv2_4431_29_15 | 17418 | 18512 | + | 3.A.1.5.19 |
| TC | HRGMv2_4431_29 | HRGMv2_4431_29_16 | 18514 | 20067 | + | 3.A.1.5.19 |
| TC | HRGMv2_4431_29 | HRGMv2_4431_29_17 | 20070 | 22220 | + | 3.A.1.5.25 |
| TC | HRGMv2_4431_29 | HRGMv2_4431_29_18 | 22210 | 23412 | + | 3.A.1.5.19 |
| pfam | HRGMv2_4431_29 | HRGMv2_4431_29_19 | 23429 | 23830 | + | DUF3899 |
| NULL(UNKNOWN) | HRGMv2_4431_29 | HRGMv2_4431_29_20 | 24010 | 24258 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4431_29 | HRGMv2_4431_29_21 | 24775 | 26790 | + | GH39 |
Gene ID: HRGMv2_4431_29_15
Type: TC
Location: 17418 - 18512 (+)
Type: TC
Location: 17418 - 18512 (+)
Gene ID: HRGMv2_4431_29_16
Type: TC
Location: 18514 - 20067 (+)
Type: TC
Location: 18514 - 20067 (+)
Gene ID: HRGMv2_4431_29_17
Type: TC
Location: 20070 - 22220 (+)
Type: TC
Location: 20070 - 22220 (+)
Gene ID: HRGMv2_4431_29_18
Type: TC
Location: 22210 - 23412 (+)
Type: TC
Location: 22210 - 23412 (+)
Gene ID: HRGMv2_4431_29_19
Type: pfam
Location: 23429 - 23830 (+)
Type: pfam
Location: 23429 - 23830 (+)
Gene ID: HRGMv2_4431_29_20
Type:
Location: 24010 - 24258 (-)
Type:
Location: 24010 - 24258 (-)
Gene ID: HRGMv2_4431_29_21
Type: CAZyme
Location: 24775 - 26790 (+)
Type: CAZyme
Location: 24775 - 26790 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-272
Species
CAG-272 sp900556615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.