dbCAN Logo

Cluster: HRGMv2_4431_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4431_26 HRGMv2_4431_26_5 4502 4729 - 3.D.1.6.4
TC HRGMv2_4431_26 HRGMv2_4431_26_6 4760 6460 - 4.C.1.1.4
TC HRGMv2_4431_26 HRGMv2_4431_26_7 7029 8159 - 3.A.1.1.26
pfam HRGMv2_4431_26 HRGMv2_4431_26_8 8404 10602 - S1 | Tex_N | HHH_3 | HHH_7 | Tex_YqgF | HHH_9 | Tex_central_region | S1_RRP5
pfam HRGMv2_4431_26 HRGMv2_4431_26_9 10741 11652 + MMR_HSR1 | RsgA_GTPase | RsgA_N
TC HRGMv2_4431_26 HRGMv2_4431_26_10 11773 12840 + 9.A.23.1.1
NULL(UNKNOWN) HRGMv2_4431_26 HRGMv2_4431_26_11 13320 13526 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_4431_26 HRGMv2_4431_26_12 14211 15296 + Glyco_tran_WbsX
CAZyme HRGMv2_4431_26 HRGMv2_4431_26_13 15300 18404 + GH38
Gene ID: HRGMv2_4431_26_5
Type: TC
Location: 4502 - 4729 (-)
Gene ID: HRGMv2_4431_26_6
Type: TC
Location: 4760 - 6460 (-)
Gene ID: HRGMv2_4431_26_7
Type: TC
Location: 7029 - 8159 (-)
Gene ID: HRGMv2_4431_26_8
Type: pfam
Location: 8404 - 10602 (-)
Gene ID: HRGMv2_4431_26_9
Type: pfam
Location: 10741 - 11652 (+)
Gene ID: HRGMv2_4431_26_10
Type: TC
Location: 11773 - 12840 (+)
Gene ID: HRGMv2_4431_26_11
Type:
Location: 13320 - 13526 (+)
Gene ID: HRGMv2_4431_26_12
Type: pfam
Location: 14211 - 15296 (+)
Gene ID: HRGMv2_4431_26_13
Type: CAZyme
Location: 15300 - 18404 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
CAG-272
→
Species
CAG-272 sp900556615

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List