Cluster: HRGMv2_4431_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4431
- CGC Family ID: CGCFAM_10183
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4431_4 | HRGMv2_4431_4_15 | 14811 | 15614 | + | CE4 |
| CAZyme | HRGMv2_4431_4 | HRGMv2_4431_4_16 | 15592 | 16281 | + | CE4 |
| TC | HRGMv2_4431_4 | HRGMv2_4431_4_17 | 16278 | 17210 | - | 3.A.11.1.4 |
| pfam | HRGMv2_4431_4 | HRGMv2_4431_4_18 | 17176 | 17622 | - | ABC_trans_CmpB |
| TC | HRGMv2_4431_4 | HRGMv2_4431_4_19 | 17673 | 20348 | - | 9.B.144.1.5 |
Gene ID: HRGMv2_4431_4_15
Type: CAZyme
Location: 14811 - 15614 (+)
Type: CAZyme
Location: 14811 - 15614 (+)
Gene ID: HRGMv2_4431_4_16
Type: CAZyme
Location: 15592 - 16281 (+)
Type: CAZyme
Location: 15592 - 16281 (+)
Gene ID: HRGMv2_4431_4_17
Type: TC
Location: 16278 - 17210 (-)
Type: TC
Location: 16278 - 17210 (-)
Gene ID: HRGMv2_4431_4_18
Type: pfam
Location: 17176 - 17622 (-)
Type: pfam
Location: 17176 - 17622 (-)
Gene ID: HRGMv2_4431_4_19
Type: TC
Location: 17673 - 20348 (-)
Type: TC
Location: 17673 - 20348 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-272
Species
CAG-272 sp900556615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.