Cluster: HRGMv2_4431_CGC1
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4431
- CGC Family ID: CGCFAM_10182
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4431_3 | HRGMv2_4431_3_35 | 33461 | 34519 | - | GH179 |
| peptidase | HRGMv2_4431_3 | HRGMv2_4431_3_36 | 34555 | 35364 | - | S09.UPW |
| pfam | HRGMv2_4431_3 | HRGMv2_4431_3_37 | 35532 | 36500 | - | AP_endonuc_2 |
| CAZyme | HRGMv2_4431_3 | HRGMv2_4431_3_38 | 36524 | 37621 | - | GH179 |
| NULL(UNKNOWN) | HRGMv2_4431_3 | HRGMv2_4431_3_39 | 37918 | 38613 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4431_3 | HRGMv2_4431_3_40 | 38582 | 39736 | - | GT28 |
| pfam | HRGMv2_4431_3 | HRGMv2_4431_3_41 | 39724 | 40215 | - | CrtO |
| TC | HRGMv2_4431_3 | HRGMv2_4431_3_42 | 40234 | 40803 | - | 4.F.1.1.8 |
| TC | HRGMv2_4431_3 | HRGMv2_4431_3_43 | 40818 | 42167 | - | 2.A.86.1.8 |
| TF | HRGMv2_4431_3 | HRGMv2_4431_3_44 | 42167 | 42625 | - | MarR |
| NULL(UNKNOWN) | HRGMv2_4431_3 | HRGMv2_4431_3_45 | 43805 | 44575 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_4431_3 | HRGMv2_4431_3_46 | 44704 | 45801 | + | 3.A.1.132.4 |
Gene ID: HRGMv2_4431_3_35
Type: CAZyme
Location: 33461 - 34519 (-)
Type: CAZyme
Location: 33461 - 34519 (-)
Gene ID: HRGMv2_4431_3_36
Type: peptidase
Location: 34555 - 35364 (-)
Type: peptidase
Location: 34555 - 35364 (-)
Gene ID: HRGMv2_4431_3_37
Type: pfam
Location: 35532 - 36500 (-)
Type: pfam
Location: 35532 - 36500 (-)
Gene ID: HRGMv2_4431_3_38
Type: CAZyme
Location: 36524 - 37621 (-)
Type: CAZyme
Location: 36524 - 37621 (-)
Gene ID: HRGMv2_4431_3_39
Type:
Location: 37918 - 38613 (-)
Type:
Location: 37918 - 38613 (-)
Gene ID: HRGMv2_4431_3_40
Type: CAZyme
Location: 38582 - 39736 (-)
Type: CAZyme
Location: 38582 - 39736 (-)
Gene ID: HRGMv2_4431_3_41
Type: pfam
Location: 39724 - 40215 (-)
Type: pfam
Location: 39724 - 40215 (-)
Gene ID: HRGMv2_4431_3_42
Type: TC
Location: 40234 - 40803 (-)
Type: TC
Location: 40234 - 40803 (-)
Gene ID: HRGMv2_4431_3_43
Type: TC
Location: 40818 - 42167 (-)
Type: TC
Location: 40818 - 42167 (-)
Gene ID: HRGMv2_4431_3_44
Type: TF
Location: 42167 - 42625 (-)
Type: TF
Location: 42167 - 42625 (-)
Gene ID: HRGMv2_4431_3_45
Type:
Location: 43805 - 44575 (+)
Type:
Location: 43805 - 44575 (+)
Gene ID: HRGMv2_4431_3_46
Type: TC
Location: 44704 - 45801 (+)
Type: TC
Location: 44704 - 45801 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
CAG-272
Species
CAG-272 sp900556615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.