Cluster: HRGMv2_4430_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4430
- CGC Family ID: CGCFAM_01134
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4430_5 | HRGMv2_4430_5_31 | 31380 | 32753 | - | GH30_4 |
| pfam | HRGMv2_4430_5 | HRGMv2_4430_5_32 | 32750 | 33184 | - | Acetyltransf_1 | FR47 | Acetyltransf_7 | Acetyltransf_10 |
| TC | HRGMv2_4430_5 | HRGMv2_4430_5_33 | 33330 | 34208 | + | 3.A.1.3.2 |
| TC | HRGMv2_4430_5 | HRGMv2_4430_5_34 | 34275 | 34985 | + | 3.A.1.3.20 |
| TC | HRGMv2_4430_5 | HRGMv2_4430_5_35 | 34969 | 35691 | + | 3.A.1.3.25 |
Gene ID: HRGMv2_4430_5_31
Type: CAZyme
Location: 31380 - 32753 (-)
Type: CAZyme
Location: 31380 - 32753 (-)
Gene ID: HRGMv2_4430_5_32
Type: pfam
Location: 32750 - 33184 (-)
Type: pfam
Location: 32750 - 33184 (-)
Gene ID: HRGMv2_4430_5_33
Type: TC
Location: 33330 - 34208 (+)
Type: TC
Location: 33330 - 34208 (+)
Gene ID: HRGMv2_4430_5_34
Type: TC
Location: 34275 - 34985 (+)
Type: TC
Location: 34275 - 34985 (+)
Gene ID: HRGMv2_4430_5_35
Type: TC
Location: 34969 - 35691 (+)
Type: TC
Location: 34969 - 35691 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp944380545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.