Cluster: HRGMv2_4430_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4430
- CGC Family ID: CGCFAM_04474
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4430_4 | HRGMv2_4430_4_10 | 7211 | 8188 | + | 3.A.7.19.1 |
| pfam | HRGMv2_4430_4 | HRGMv2_4430_4_11 | 8205 | 8396 | + | HTH_17 |
| NULL(UNKNOWN) | HRGMv2_4430_4 | HRGMv2_4430_4_12 | 8502 | 9698 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4430_4 | HRGMv2_4430_4_13 | 10103 | 12499 | + | GH51_2 |
| pfam | HRGMv2_4430_4 | HRGMv2_4430_4_14 | 12496 | 13380 | + | Exo_endo_phos |
| TC | HRGMv2_4430_4 | HRGMv2_4430_4_15 | 13689 | 14477 | + | 2.A.5.5.2 |
Gene ID: HRGMv2_4430_4_10
Type: TC
Location: 7211 - 8188 (+)
Type: TC
Location: 7211 - 8188 (+)
Gene ID: HRGMv2_4430_4_11
Type: pfam
Location: 8205 - 8396 (+)
Type: pfam
Location: 8205 - 8396 (+)
Gene ID: HRGMv2_4430_4_12
Type:
Location: 8502 - 9698 (+)
Type:
Location: 8502 - 9698 (+)
Gene ID: HRGMv2_4430_4_13
Type: CAZyme
Location: 10103 - 12499 (+)
Type: CAZyme
Location: 10103 - 12499 (+)
Gene ID: HRGMv2_4430_4_14
Type: pfam
Location: 12496 - 13380 (+)
Type: pfam
Location: 12496 - 13380 (+)
Gene ID: HRGMv2_4430_4_15
Type: TC
Location: 13689 - 14477 (+)
Type: TC
Location: 13689 - 14477 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp944380545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.