Cluster: HRGMv2_4430_CGC30
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4430
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4430_57 | HRGMv2_4430_57_1 | 171 | 2414 | + | GH95 |
| CAZyme | HRGMv2_4430_57 | HRGMv2_4430_57_2 | 2414 | 4063 | + | GH110 |
| NULL(UNKNOWN) | HRGMv2_4430_57 | HRGMv2_4430_57_3 | 4151 | 4486 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_4430_57 | HRGMv2_4430_57_4 | 4562 | 5149 | - | TetR_N |
| TC | HRGMv2_4430_57 | HRGMv2_4430_57_5 | 5297 | 6763 | + | 2.A.2.3.6 |
| CAZyme | HRGMv2_4430_57 | HRGMv2_4430_57_6 | 6768 | 9113 | + | CBM67 | GH78 |
Gene ID: HRGMv2_4430_57_1
Type: CAZyme
Location: 171 - 2414 (+)
Type: CAZyme
Location: 171 - 2414 (+)
Gene ID: HRGMv2_4430_57_2
Type: CAZyme
Location: 2414 - 4063 (+)
Type: CAZyme
Location: 2414 - 4063 (+)
Gene ID: HRGMv2_4430_57_3
Type:
Location: 4151 - 4486 (+)
Type:
Location: 4151 - 4486 (+)
Gene ID: HRGMv2_4430_57_4
Type: STP
Location: 4562 - 5149 (-)
Type: STP
Location: 4562 - 5149 (-)
Gene ID: HRGMv2_4430_57_5
Type: TC
Location: 5297 - 6763 (+)
Type: TC
Location: 5297 - 6763 (+)
Gene ID: HRGMv2_4430_57_6
Type: CAZyme
Location: 6768 - 9113 (+)
Type: CAZyme
Location: 6768 - 9113 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp944380545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.