Cluster: HRGMv2_4430_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4430
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4430_3 | HRGMv2_4430_3_53 | 57762 | 59195 | + | 2.A.2.1.1 |
| CAZyme | HRGMv2_4430_3 | HRGMv2_4430_3_54 | 59334 | 62018 | - | GH95 |
| pfam | HRGMv2_4430_3 | HRGMv2_4430_3_55 | 62197 | 64050 | + | Radical_SAM | Radical_SAM_N | DUF3362 |
| CAZyme | HRGMv2_4430_3 | HRGMv2_4430_3_56 | 64068 | 66029 | + | GH163 |
| pfam | HRGMv2_4430_3 | HRGMv2_4430_3_57 | 66120 | 67211 | - | Aldo_ket_red | Fer4_9 | Fer4_17 |
| CAZyme | HRGMv2_4430_3 | HRGMv2_4430_3_58 | 67484 | 69472 | + | GH18 |
Gene ID: HRGMv2_4430_3_53
Type: TC
Location: 57762 - 59195 (+)
Type: TC
Location: 57762 - 59195 (+)
Gene ID: HRGMv2_4430_3_54
Type: CAZyme
Location: 59334 - 62018 (-)
Type: CAZyme
Location: 59334 - 62018 (-)
Gene ID: HRGMv2_4430_3_55
Type: pfam
Location: 62197 - 64050 (+)
Type: pfam
Location: 62197 - 64050 (+)
Gene ID: HRGMv2_4430_3_56
Type: CAZyme
Location: 64068 - 66029 (+)
Type: CAZyme
Location: 64068 - 66029 (+)
Gene ID: HRGMv2_4430_3_57
Type: pfam
Location: 66120 - 67211 (-)
Type: pfam
Location: 66120 - 67211 (-)
Gene ID: HRGMv2_4430_3_58
Type: CAZyme
Location: 67484 - 69472 (+)
Type: CAZyme
Location: 67484 - 69472 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp944380545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.