dbCAN Logo

Cluster: HRGMv2_4430_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4430_31 HRGMv2_4430_31_8 7090 8970 + GH13_9
pfam HRGMv2_4430_31 HRGMv2_4430_31_9 8984 10192 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_4430_31 HRGMv2_4430_31_10 10195 11313 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_4430_31 HRGMv2_4430_31_11 11334 12755 + GT5
pfam HRGMv2_4430_31 HRGMv2_4430_31_12 12813 14849 - DUF5054
CAZyme HRGMv2_4430_31 HRGMv2_4430_31_13 14864 16918 - GH2
CAZyme HRGMv2_4430_31 HRGMv2_4430_31_14 17082 19541 - GH3
pfam HRGMv2_4430_31 HRGMv2_4430_31_15 19686 20015 - SCP2
TC HRGMv2_4430_31 HRGMv2_4430_31_16 20086 20442 - 9.A.11.1.1
TC HRGMv2_4430_31 HRGMv2_4430_31_17 20495 21241 - 3.A.1.122.14
TC HRGMv2_4430_31 HRGMv2_4430_31_18 21393 21836 + 9.A.11.1.1
Gene ID: HRGMv2_4430_31_8
Type: CAZyme
Location: 7090 - 8970 (+)
Gene ID: HRGMv2_4430_31_9
Type: pfam
Location: 8984 - 10192 (+)
Gene ID: HRGMv2_4430_31_10
Type: pfam
Location: 10195 - 11313 (+)
Gene ID: HRGMv2_4430_31_11
Type: CAZyme
Location: 11334 - 12755 (+)
Gene ID: HRGMv2_4430_31_12
Type: pfam
Location: 12813 - 14849 (-)
Gene ID: HRGMv2_4430_31_13
Type: CAZyme
Location: 14864 - 16918 (-)
Gene ID: HRGMv2_4430_31_14
Type: CAZyme
Location: 17082 - 19541 (-)
Gene ID: HRGMv2_4430_31_15
Type: pfam
Location: 19686 - 20015 (-)
Gene ID: HRGMv2_4430_31_16
Type: TC
Location: 20086 - 20442 (-)
Gene ID: HRGMv2_4430_31_17
Type: TC
Location: 20495 - 21241 (-)
Gene ID: HRGMv2_4430_31_18
Type: TC
Location: 21393 - 21836 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List