Cluster: HRGMv2_4430_CGC14
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4430
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4430_16 | HRGMv2_4430_16_4 | 3269 | 4891 | + | GH123 |
| pfam | HRGMv2_4430_16 | HRGMv2_4430_16_5 | 5028 | 6200 | - | malic | malic | Malic_M |
| pfam | HRGMv2_4430_16 | HRGMv2_4430_16_6 | 6241 | 7743 | - | FGGY_N | FGGY_C |
| TC | HRGMv2_4430_16 | HRGMv2_4430_16_7 | 7969 | 8196 | - | 3.D.1.6.4 |
| pfam | HRGMv2_4430_16 | HRGMv2_4430_16_8 | 8322 | 9149 | + | Shikimate_dh_N |
| STP | HRGMv2_4430_16 | HRGMv2_4430_16_9 | 9146 | 9649 | + | SKI |
| TC | HRGMv2_4430_16 | HRGMv2_4430_16_10 | 9821 | 10660 | + | 3.A.1.103.6 |
Gene ID: HRGMv2_4430_16_4
Type: CAZyme
Location: 3269 - 4891 (+)
Type: CAZyme
Location: 3269 - 4891 (+)
Gene ID: HRGMv2_4430_16_5
Type: pfam
Location: 5028 - 6200 (-)
Type: pfam
Location: 5028 - 6200 (-)
Gene ID: HRGMv2_4430_16_6
Type: pfam
Location: 6241 - 7743 (-)
Type: pfam
Location: 6241 - 7743 (-)
Gene ID: HRGMv2_4430_16_7
Type: TC
Location: 7969 - 8196 (-)
Type: TC
Location: 7969 - 8196 (-)
Gene ID: HRGMv2_4430_16_8
Type: pfam
Location: 8322 - 9149 (+)
Type: pfam
Location: 8322 - 9149 (+)
Gene ID: HRGMv2_4430_16_9
Type: STP
Location: 9146 - 9649 (+)
Type: STP
Location: 9146 - 9649 (+)
Gene ID: HRGMv2_4430_16_10
Type: TC
Location: 9821 - 10660 (+)
Type: TC
Location: 9821 - 10660 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp944380545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.