Cluster: HRGMv2_4430_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: beta-glucan
- Genome ID: HRGMv2_4430
- CGC Family ID: CGCFAM_00107
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4430_14 | HRGMv2_4430_14_9 | 6524 | 8986 | + | 3.A.9.1.2 |
| CAZyme | HRGMv2_4430_14 | HRGMv2_4430_14_10 | 9408 | 10439 | + | GH179 |
| pfam | HRGMv2_4430_14 | HRGMv2_4430_14_11 | 10474 | 11388 | + | AP_endonuc_2 |
| pfam | HRGMv2_4430_14 | HRGMv2_4430_14_12 | 11443 | 12534 | + | Peripla_BP_4 |
| TC | HRGMv2_4430_14 | HRGMv2_4430_14_13 | 12627 | 14117 | + | 3.A.1.2.1 |
| TC | HRGMv2_4430_14 | HRGMv2_4430_14_14 | 14117 | 15190 | + | 3.A.1.2.21 |
Gene ID: HRGMv2_4430_14_9
Type: TC
Location: 6524 - 8986 (+)
Type: TC
Location: 6524 - 8986 (+)
Gene ID: HRGMv2_4430_14_10
Type: CAZyme
Location: 9408 - 10439 (+)
Type: CAZyme
Location: 9408 - 10439 (+)
Gene ID: HRGMv2_4430_14_11
Type: pfam
Location: 10474 - 11388 (+)
Type: pfam
Location: 10474 - 11388 (+)
Gene ID: HRGMv2_4430_14_12
Type: pfam
Location: 11443 - 12534 (+)
Type: pfam
Location: 11443 - 12534 (+)
Gene ID: HRGMv2_4430_14_13
Type: TC
Location: 12627 - 14117 (+)
Type: TC
Location: 12627 - 14117 (+)
Gene ID: HRGMv2_4430_14_14
Type: TC
Location: 14117 - 15190 (+)
Type: TC
Location: 14117 - 15190 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp944380545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.