Cluster: HRGMv2_4430_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4430
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4430_2 | HRGMv2_4430_2_33 | 40551 | 42074 | + | GH77 |
| NULL(UNKNOWN) | HRGMv2_4430_2 | HRGMv2_4430_2_34 | 42136 | 42948 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_4430_2 | HRGMv2_4430_2_35 | 43093 | 45285 | - | UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2 | PcrA_UvrD_tudor |
| TC | HRGMv2_4430_2 | HRGMv2_4430_2_36 | 45383 | 46597 | - | 3.B.1.1.3 |
Gene ID: HRGMv2_4430_2_33
Type: CAZyme
Location: 40551 - 42074 (+)
Type: CAZyme
Location: 40551 - 42074 (+)
Gene ID: HRGMv2_4430_2_34
Type:
Location: 42136 - 42948 (-)
Type:
Location: 42136 - 42948 (-)
Gene ID: HRGMv2_4430_2_35
Type: pfam
Location: 43093 - 45285 (-)
Type: pfam
Location: 43093 - 45285 (-)
Gene ID: HRGMv2_4430_2_36
Type: TC
Location: 45383 - 46597 (-)
Type: TC
Location: 45383 - 46597 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp944380545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.