Cluster: HRGMv2_4429_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4429
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4429_3 | HRGMv2_4429_3_71 | 87764 | 89140 | + | 3.B.1.1.5 |
| TC | HRGMv2_4429_3 | HRGMv2_4429_3_72 | 89164 | 89583 | + | 3.B.1.1.2 |
| TC | HRGMv2_4429_3 | HRGMv2_4429_3_73 | 89777 | 91177 | + | 3.B.1.1.6 |
| pfam | HRGMv2_4429_3 | HRGMv2_4429_3_74 | 91334 | 91588 | + | SecG |
| TC | HRGMv2_4429_3 | HRGMv2_4429_3_75 | 91879 | 93597 | + | 3.A.1.106.2 |
| CAZyme | HRGMv2_4429_3 | HRGMv2_4429_3_76 | 94084 | 97152 | + | CE2 |
Gene ID: HRGMv2_4429_3_71
Type: TC
Location: 87764 - 89140 (+)
Type: TC
Location: 87764 - 89140 (+)
Gene ID: HRGMv2_4429_3_72
Type: TC
Location: 89164 - 89583 (+)
Type: TC
Location: 89164 - 89583 (+)
Gene ID: HRGMv2_4429_3_73
Type: TC
Location: 89777 - 91177 (+)
Type: TC
Location: 89777 - 91177 (+)
Gene ID: HRGMv2_4429_3_74
Type: pfam
Location: 91334 - 91588 (+)
Type: pfam
Location: 91334 - 91588 (+)
Gene ID: HRGMv2_4429_3_75
Type: TC
Location: 91879 - 93597 (+)
Type: TC
Location: 91879 - 93597 (+)
Gene ID: HRGMv2_4429_3_76
Type: CAZyme
Location: 94084 - 97152 (+)
Type: CAZyme
Location: 94084 - 97152 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1532
Species
UMGS1532 sp902791335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.