Cluster: HRGMv2_4429_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4429
- CGC Family ID: CGCFAM_03456
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4429_2 | HRGMv2_4429_2_17 | 19360 | 20325 | + | GT2 |
| pfam | HRGMv2_4429_2 | HRGMv2_4429_2_18 | 20491 | 21213 | + | Methyltrans_RNA | PUA_4 |
| TC | HRGMv2_4429_2 | HRGMv2_4429_2_19 | 21397 | 21993 | + | 3.D.1.8.1 |
| NULL(UNKNOWN) | HRGMv2_4429_2 | HRGMv2_4429_2_20 | 21980 | 22669 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_4429_2 | HRGMv2_4429_2_21 | 22681 | 24729 | + | GH36 |
Gene ID: HRGMv2_4429_2_17
Type: CAZyme
Location: 19360 - 20325 (+)
Type: CAZyme
Location: 19360 - 20325 (+)
Gene ID: HRGMv2_4429_2_18
Type: pfam
Location: 20491 - 21213 (+)
Type: pfam
Location: 20491 - 21213 (+)
Gene ID: HRGMv2_4429_2_19
Type: TC
Location: 21397 - 21993 (+)
Type: TC
Location: 21397 - 21993 (+)
Gene ID: HRGMv2_4429_2_20
Type:
Location: 21980 - 22669 (+)
Type:
Location: 21980 - 22669 (+)
Gene ID: HRGMv2_4429_2_21
Type: CAZyme
Location: 22681 - 24729 (+)
Type: CAZyme
Location: 22681 - 24729 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1532
Species
UMGS1532 sp902791335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.