dbCAN Logo

Cluster: HRGMv2_4429_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4429_50 HRGMv2_4429_50_1 555 1616 + 3.A.1.2.3
TC HRGMv2_4429_50 HRGMv2_4429_50_2 2003 3547 + 3.A.1.2.3
TC HRGMv2_4429_50 HRGMv2_4429_50_3 3619 4704 + 3.A.1.2.3
pfam HRGMv2_4429_50 HRGMv2_4429_50_4 4735 5157 + Flg_new
CAZyme HRGMv2_4429_50 HRGMv2_4429_50_5 5716 7428 + GH31_14
STP HRGMv2_4429_50 HRGMv2_4429_50_6 7776 8738 - Peripla_BP_1
TC HRGMv2_4429_50 HRGMv2_4429_50_7 8728 10458 - 9.B.33.1.1
Gene ID: HRGMv2_4429_50_1
Type: TC
Location: 555 - 1616 (+)
Gene ID: HRGMv2_4429_50_2
Type: TC
Location: 2003 - 3547 (+)
Gene ID: HRGMv2_4429_50_3
Type: TC
Location: 3619 - 4704 (+)
Gene ID: HRGMv2_4429_50_4
Type: pfam
Location: 4735 - 5157 (+)
Gene ID: HRGMv2_4429_50_5
Type: CAZyme
Location: 5716 - 7428 (+)
Gene ID: HRGMv2_4429_50_6
Type: STP
Location: 7776 - 8738 (-)
Gene ID: HRGMv2_4429_50_7
Type: TC
Location: 8728 - 10458 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List