Cluster: HRGMv2_4429_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4429
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4429_30 | HRGMv2_4429_30_14 | 16467 | 19208 | - | 3.A.5.1.3 |
| pfam | HRGMv2_4429_30 | HRGMv2_4429_30_15 | 20381 | 22159 | - | PEPCK_GTP | PEPCK_N |
| TF | HRGMv2_4429_30 | HRGMv2_4429_30_16 | 22763 | 23551 | - | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4429_30 | HRGMv2_4429_30_17 | 23838 | 26261 | + | GH2 |
Gene ID: HRGMv2_4429_30_14
Type: TC
Location: 16467 - 19208 (-)
Type: TC
Location: 16467 - 19208 (-)
Gene ID: HRGMv2_4429_30_15
Type: pfam
Location: 20381 - 22159 (-)
Type: pfam
Location: 20381 - 22159 (-)
Gene ID: HRGMv2_4429_30_16
Type: TF
Location: 22763 - 23551 (-)
Type: TF
Location: 22763 - 23551 (-)
Gene ID: HRGMv2_4429_30_17
Type: CAZyme
Location: 23838 - 26261 (+)
Type: CAZyme
Location: 23838 - 26261 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1532
Species
UMGS1532 sp902791335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.