Cluster: HRGMv2_4429_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4429
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4429_28 | HRGMv2_4429_28_13 | 18582 | 19442 | + | 2.A.7.2.1 |
| CAZyme | HRGMv2_4429_28 | HRGMv2_4429_28_14 | 20256 | 21953 | + | GH129 |
| NULL(UNKNOWN) | HRGMv2_4429_28 | HRGMv2_4429_28_15 | 22124 | 23236 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | HRGMv2_4429_28 | HRGMv2_4429_28_16 | 23497 | 24198 | - | HTH_3 |
| TC | HRGMv2_4429_28 | HRGMv2_4429_28_17 | 25027 | 26769 | - | 3.D.1.6.4 |
| TC | HRGMv2_4429_28 | HRGMv2_4429_28_18 | 26786 | 28345 | - | 3.D.1.5.1 |
Gene ID: HRGMv2_4429_28_13
Type: TC
Location: 18582 - 19442 (+)
Type: TC
Location: 18582 - 19442 (+)
Gene ID: HRGMv2_4429_28_14
Type: CAZyme
Location: 20256 - 21953 (+)
Type: CAZyme
Location: 20256 - 21953 (+)
Gene ID: HRGMv2_4429_28_15
Type:
Location: 22124 - 23236 (-)
Type:
Location: 22124 - 23236 (-)
Gene ID: HRGMv2_4429_28_16
Type: TF
Location: 23497 - 24198 (-)
Type: TF
Location: 23497 - 24198 (-)
Gene ID: HRGMv2_4429_28_17
Type: TC
Location: 25027 - 26769 (-)
Type: TC
Location: 25027 - 26769 (-)
Gene ID: HRGMv2_4429_28_18
Type: TC
Location: 26786 - 28345 (-)
Type: TC
Location: 26786 - 28345 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1532
Species
UMGS1532 sp902791335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.