Cluster: HRGMv2_4429_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_4429
- CGC Family ID: CGCFAM_00018
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4429_13 | HRGMv2_4429_13_22 | 23006 | 24052 | + | 9.B.18.2.1 |
| pfam | HRGMv2_4429_13 | HRGMv2_4429_13_23 | 24208 | 25404 | + | Epimerase | Polysacc_synt_C |
| pfam | HRGMv2_4429_13 | HRGMv2_4429_13_24 | 25418 | 26593 | + | Epimerase_2 |
| CAZyme | HRGMv2_4429_13 | HRGMv2_4429_13_25 | 26615 | 27355 | + | GT26 |
| CAZyme | HRGMv2_4429_13 | HRGMv2_4429_13_26 | 27374 | 28426 | + | GT4 |
| CAZyme | HRGMv2_4429_13 | HRGMv2_4429_13_27 | 28451 | 29485 | + | GT2 |
Gene ID: HRGMv2_4429_13_22
Type: TC
Location: 23006 - 24052 (+)
Type: TC
Location: 23006 - 24052 (+)
Gene ID: HRGMv2_4429_13_23
Type: pfam
Location: 24208 - 25404 (+)
Type: pfam
Location: 24208 - 25404 (+)
Gene ID: HRGMv2_4429_13_24
Type: pfam
Location: 25418 - 26593 (+)
Type: pfam
Location: 25418 - 26593 (+)
Gene ID: HRGMv2_4429_13_25
Type: CAZyme
Location: 26615 - 27355 (+)
Type: CAZyme
Location: 26615 - 27355 (+)
Gene ID: HRGMv2_4429_13_26
Type: CAZyme
Location: 27374 - 28426 (+)
Type: CAZyme
Location: 27374 - 28426 (+)
Gene ID: HRGMv2_4429_13_27
Type: CAZyme
Location: 28451 - 29485 (+)
Type: CAZyme
Location: 28451 - 29485 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1532
Species
UMGS1532 sp902791335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.