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Cluster: HRGMv2_4429_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4429_11 HRGMv2_4429_11_26 34653 35456 + 3.A.1.3.25
TC HRGMv2_4429_11 HRGMv2_4429_11_27 35693 36361 + 3.A.1.3.25
TC HRGMv2_4429_11 HRGMv2_4429_11_28 36351 37097 + 3.A.1.3.15
CAZyme HRGMv2_4429_11 HRGMv2_4429_11_29 37464 39983 + CE17
pfam HRGMv2_4429_11 HRGMv2_4429_11_30 40627 42534 - tRNA-synt_2b | TGS | HGTP_anticodon | tRNA_SAD
CAZyme HRGMv2_4429_11 HRGMv2_4429_11_31 43047 44597 - GH13_44
Gene ID: HRGMv2_4429_11_26
Type: TC
Location: 34653 - 35456 (+)
Gene ID: HRGMv2_4429_11_27
Type: TC
Location: 35693 - 36361 (+)
Gene ID: HRGMv2_4429_11_28
Type: TC
Location: 36351 - 37097 (+)
Gene ID: HRGMv2_4429_11_29
Type: CAZyme
Location: 37464 - 39983 (+)
Gene ID: HRGMv2_4429_11_30
Type: pfam
Location: 40627 - 42534 (-)
Gene ID: HRGMv2_4429_11_31
Type: CAZyme
Location: 43047 - 44597 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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