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Cluster: HRGMv2_4429_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4429_5 HRGMv2_4429_5_52 56110 57531 - 2.A.25.1.4
TC HRGMv2_4429_5 HRGMv2_4429_5_53 57986 58642 + 1.A.62.2.1
peptidase HRGMv2_4429_5 HRGMv2_4429_5_54 58639 59151 + M95.UPW
CAZyme HRGMv2_4429_5 HRGMv2_4429_5_55 59200 60699 + GH77
CAZyme HRGMv2_4429_5 HRGMv2_4429_5_56 61059 64136 + GH106
pfam HRGMv2_4429_5 HRGMv2_4429_5_57 64315 65622 + Abhydrolase_1
TC HRGMv2_4429_5 HRGMv2_4429_5_58 66251 67573 + 2.A.26.1.1
Gene ID: HRGMv2_4429_5_52
Type: TC
Location: 56110 - 57531 (-)
Gene ID: HRGMv2_4429_5_53
Type: TC
Location: 57986 - 58642 (+)
Gene ID: HRGMv2_4429_5_54
Type: peptidase
Location: 58639 - 59151 (+)
Gene ID: HRGMv2_4429_5_55
Type: CAZyme
Location: 59200 - 60699 (+)
Gene ID: HRGMv2_4429_5_56
Type: CAZyme
Location: 61059 - 64136 (+)
Gene ID: HRGMv2_4429_5_57
Type: pfam
Location: 64315 - 65622 (+)
Gene ID: HRGMv2_4429_5_58
Type: TC
Location: 66251 - 67573 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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