Cluster: HRGMv2_4429_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4429
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4429_5 | HRGMv2_4429_5_28 | 26185 | 27522 | + | 2.A.66.1.32 |
| pfam | HRGMv2_4429_5 | HRGMv2_4429_5_29 | 27749 | 28024 | - | Glyco_hydro_130 |
| pfam | HRGMv2_4429_5 | HRGMv2_4429_5_30 | 28825 | 29670 | - | PAP2 | PAP2_3 |
| CAZyme | HRGMv2_4429_5 | HRGMv2_4429_5_31 | 29675 | 30784 | - | GT28 |
| pfam | HRGMv2_4429_5 | HRGMv2_4429_5_32 | 30759 | 31274 | - | CrtO |
| TC | HRGMv2_4429_5 | HRGMv2_4429_5_33 | 31357 | 33096 | - | 3.A.1.135.5 |
| TC | HRGMv2_4429_5 | HRGMv2_4429_5_34 | 33093 | 34814 | - | 3.A.1.135.5 |
Gene ID: HRGMv2_4429_5_28
Type: TC
Location: 26185 - 27522 (+)
Type: TC
Location: 26185 - 27522 (+)
Gene ID: HRGMv2_4429_5_29
Type: pfam
Location: 27749 - 28024 (-)
Type: pfam
Location: 27749 - 28024 (-)
Gene ID: HRGMv2_4429_5_30
Type: pfam
Location: 28825 - 29670 (-)
Type: pfam
Location: 28825 - 29670 (-)
Gene ID: HRGMv2_4429_5_31
Type: CAZyme
Location: 29675 - 30784 (-)
Type: CAZyme
Location: 29675 - 30784 (-)
Gene ID: HRGMv2_4429_5_32
Type: pfam
Location: 30759 - 31274 (-)
Type: pfam
Location: 30759 - 31274 (-)
Gene ID: HRGMv2_4429_5_33
Type: TC
Location: 31357 - 33096 (-)
Type: TC
Location: 31357 - 33096 (-)
Gene ID: HRGMv2_4429_5_34
Type: TC
Location: 33093 - 34814 (-)
Type: TC
Location: 33093 - 34814 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1532
Species
UMGS1532 sp902791335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.