Cluster: HRGMv2_4429_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4429
- CGC Family ID: CGCFAM_10621
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4429_1 | HRGMv2_4429_1_70 | 83419 | 84864 | - | 2.A.38.1.1 |
| TC | HRGMv2_4429_1 | HRGMv2_4429_1_71 | 84870 | 86234 | - | 2.A.38.1.1 |
| TF | HRGMv2_4429_1 | HRGMv2_4429_1_72 | 86785 | 87630 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_4429_1 | HRGMv2_4429_1_73 | 87795 | 89669 | + | GH5_19 |
| CAZyme | HRGMv2_4429_1 | HRGMv2_4429_1_74 | 89711 | 91915 | + | GH36 |
Gene ID: HRGMv2_4429_1_70
Type: TC
Location: 83419 - 84864 (-)
Type: TC
Location: 83419 - 84864 (-)
Gene ID: HRGMv2_4429_1_71
Type: TC
Location: 84870 - 86234 (-)
Type: TC
Location: 84870 - 86234 (-)
Gene ID: HRGMv2_4429_1_72
Type: TF
Location: 86785 - 87630 (+)
Type: TF
Location: 86785 - 87630 (+)
Gene ID: HRGMv2_4429_1_73
Type: CAZyme
Location: 87795 - 89669 (+)
Type: CAZyme
Location: 87795 - 89669 (+)
Gene ID: HRGMv2_4429_1_74
Type: CAZyme
Location: 89711 - 91915 (+)
Type: CAZyme
Location: 89711 - 91915 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1532
Species
UMGS1532 sp902791335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.