Cluster: HRGMv2_4428_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4428
- CGC Family ID: CGCFAM_00088
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_4428_24 | HRGMv2_4428_24_8 | 6287 | 6856 | + | 3.A.1.148.1 |
| TC | HRGMv2_4428_24 | HRGMv2_4428_24_9 | 7130 | 8296 | + | 3.A.1.1.22 |
| CAZyme | HRGMv2_4428_24 | HRGMv2_4428_24_10 | 8433 | 9914 | - | GH77 |
| TC | HRGMv2_4428_24 | HRGMv2_4428_24_11 | 9921 | 10268 | - | 3.A.1.1.45 |
Gene ID: HRGMv2_4428_24_8
Type: TC
Location: 6287 - 6856 (+)
Type: TC
Location: 6287 - 6856 (+)
Gene ID: HRGMv2_4428_24_9
Type: TC
Location: 7130 - 8296 (+)
Type: TC
Location: 7130 - 8296 (+)
Gene ID: HRGMv2_4428_24_10
Type: CAZyme
Location: 8433 - 9914 (-)
Type: CAZyme
Location: 8433 - 9914 (-)
Gene ID: HRGMv2_4428_24_11
Type: TC
Location: 9921 - 10268 (-)
Type: TC
Location: 9921 - 10268 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Hominicoprocola
Species
Hominicoprocola sp934553255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.