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Cluster: HRGMv2_4428_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4428_12 HRGMv2_4428_12_18 11264 12667 + 2.A.25.1.3
pfam HRGMv2_4428_12 HRGMv2_4428_12_19 12725 13633 - Lipase_GDSL_2
TC HRGMv2_4428_12 HRGMv2_4428_12_20 13660 15051 - 2.A.50.2.1
TF HRGMv2_4428_12 HRGMv2_4428_12_21 15219 16220 + HTH_11
TC HRGMv2_4428_12 HRGMv2_4428_12_22 16233 16787 + 2.A.51.1.6
TC HRGMv2_4428_12 HRGMv2_4428_12_23 16784 17344 + 2.A.51.1.6
TC HRGMv2_4428_12 HRGMv2_4428_12_24 17396 18733 - 2.A.37.3.3
TC HRGMv2_4428_12 HRGMv2_4428_12_25 18954 20609 - 3.A.1.5.1
TC HRGMv2_4428_12 HRGMv2_4428_12_26 20620 21780 - 3.A.18.1.1
CAZyme HRGMv2_4428_12 HRGMv2_4428_12_27 21882 24296 - GT35
CAZyme HRGMv2_4428_12 HRGMv2_4428_12_28 24310 25746 - GT5
pfam HRGMv2_4428_12 HRGMv2_4428_12_29 25790 26902 - NTP_transferase | Hexapep_GlmU
pfam HRGMv2_4428_12 HRGMv2_4428_12_30 26899 28107 - NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_4428_12 HRGMv2_4428_12_31 28104 30014 - CBM48 | GH13_9
Gene ID: HRGMv2_4428_12_18
Type: TC
Location: 11264 - 12667 (+)
Gene ID: HRGMv2_4428_12_19
Type: pfam
Location: 12725 - 13633 (-)
Gene ID: HRGMv2_4428_12_20
Type: TC
Location: 13660 - 15051 (-)
Gene ID: HRGMv2_4428_12_21
Type: TF
Location: 15219 - 16220 (+)
Gene ID: HRGMv2_4428_12_22
Type: TC
Location: 16233 - 16787 (+)
Gene ID: HRGMv2_4428_12_23
Type: TC
Location: 16784 - 17344 (+)
Gene ID: HRGMv2_4428_12_24
Type: TC
Location: 17396 - 18733 (-)
Gene ID: HRGMv2_4428_12_25
Type: TC
Location: 18954 - 20609 (-)
Gene ID: HRGMv2_4428_12_26
Type: TC
Location: 20620 - 21780 (-)
Gene ID: HRGMv2_4428_12_27
Type: CAZyme
Location: 21882 - 24296 (-)
Gene ID: HRGMv2_4428_12_28
Type: CAZyme
Location: 24310 - 25746 (-)
Gene ID: HRGMv2_4428_12_29
Type: pfam
Location: 25790 - 26902 (-)
Gene ID: HRGMv2_4428_12_30
Type: pfam
Location: 26899 - 28107 (-)
Gene ID: HRGMv2_4428_12_31
Type: CAZyme
Location: 28104 - 30014 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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