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Cluster: HRGMv2_4428_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4428_8 HRGMv2_4428_8_87 93291 94838 + 3.A.1.2.12
pfam HRGMv2_4428_8 HRGMv2_4428_8_88 94831 95937 + BPD_transp_2
TC HRGMv2_4428_8 HRGMv2_4428_8_89 95934 96914 + 3.A.1.2.12
peptidase HRGMv2_4428_8 HRGMv2_4428_8_90 96973 98331 + M38.UNW
CAZyme HRGMv2_4428_8 HRGMv2_4428_8_91 98389 99735 - GT4
pfam HRGMv2_4428_8 HRGMv2_4428_8_92 99832 100716 + PseudoU_synth_2
TC HRGMv2_4428_8 HRGMv2_4428_8_93 100749 102131 - 2.A.66.1.33
Gene ID: HRGMv2_4428_8_87
Type: TC
Location: 93291 - 94838 (+)
Gene ID: HRGMv2_4428_8_88
Type: pfam
Location: 94831 - 95937 (+)
Gene ID: HRGMv2_4428_8_89
Type: TC
Location: 95934 - 96914 (+)
Gene ID: HRGMv2_4428_8_90
Type: peptidase
Location: 96973 - 98331 (+)
Gene ID: HRGMv2_4428_8_91
Type: CAZyme
Location: 98389 - 99735 (-)
Gene ID: HRGMv2_4428_8_92
Type: pfam
Location: 99832 - 100716 (+)
Gene ID: HRGMv2_4428_8_93
Type: TC
Location: 100749 - 102131 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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