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Cluster: HRGMv2_4428_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_4428_2 HRGMv2_4428_2_86 93525 94337 - CE4
NULL(UNKNOWN) HRGMv2_4428_2 HRGMv2_4428_2_87 94624 95184 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_4428_2 HRGMv2_4428_2_88 95197 95715 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_4428_2 HRGMv2_4428_2_89 95734 97464 + 3.A.2.3.3
TC HRGMv2_4428_2 HRGMv2_4428_2_90 97478 98773 + 3.A.2.3.3
TC HRGMv2_4428_2 HRGMv2_4428_2_91 98784 99398 + 3.A.2.3.3
TC HRGMv2_4428_2 HRGMv2_4428_2_92 99395 101221 + 3.A.2.3.3
TC HRGMv2_4428_2 HRGMv2_4428_2_93 101244 101678 + 3.A.2.3.3
Gene ID: HRGMv2_4428_2_86
Type: CAZyme
Location: 93525 - 94337 (-)
Gene ID: HRGMv2_4428_2_87
Type:
Location: 94624 - 95184 (+)
Gene ID: HRGMv2_4428_2_88
Type:
Location: 95197 - 95715 (+)
Gene ID: HRGMv2_4428_2_89
Type: TC
Location: 95734 - 97464 (+)
Gene ID: HRGMv2_4428_2_90
Type: TC
Location: 97478 - 98773 (+)
Gene ID: HRGMv2_4428_2_91
Type: TC
Location: 98784 - 99398 (+)
Gene ID: HRGMv2_4428_2_92
Type: TC
Location: 99395 - 101221 (+)
Gene ID: HRGMv2_4428_2_93
Type: TC
Location: 101244 - 101678 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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