Cluster: HRGMv2_4428_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_4428
- CGC Family ID: CGCFAM_00011
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4428_2 | HRGMv2_4428_2_52 | 56008 | 57639 | - | GT4 |
| CAZyme | HRGMv2_4428_2 | HRGMv2_4428_2_53 | 57636 | 59939 | - | GT4 | GT4 |
| TC | HRGMv2_4428_2 | HRGMv2_4428_2_54 | 59946 | 60692 | - | 3.A.1.103.4 |
Gene ID: HRGMv2_4428_2_52
Type: CAZyme
Location: 56008 - 57639 (-)
Type: CAZyme
Location: 56008 - 57639 (-)
Gene ID: HRGMv2_4428_2_53
Type: CAZyme
Location: 57636 - 59939 (-)
Type: CAZyme
Location: 57636 - 59939 (-)
Gene ID: HRGMv2_4428_2_54
Type: TC
Location: 59946 - 60692 (-)
Type: TC
Location: 59946 - 60692 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Hominicoprocola
Species
Hominicoprocola sp934553255
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.