Cluster: HRGMv2_4427_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4427
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4427_13 | HRGMv2_4427_13_29 | 24355 | 26769 | - | GH2 |
| TF | HRGMv2_4427_13 | HRGMv2_4427_13_30 | 26846 | 27655 | - | HTH_AraC | HTH_AraC |
| pfam | HRGMv2_4427_13 | HRGMv2_4427_13_31 | 27724 | 28638 | - | R3H | KH_KhpA-B | Jag_N |
| TC | HRGMv2_4427_13 | HRGMv2_4427_13_32 | 28660 | 29547 | - | 2.A.9.3.6 |
Gene ID: HRGMv2_4427_13_29
Type: CAZyme
Location: 24355 - 26769 (-)
Type: CAZyme
Location: 24355 - 26769 (-)
Gene ID: HRGMv2_4427_13_30
Type: TF
Location: 26846 - 27655 (-)
Type: TF
Location: 26846 - 27655 (-)
Gene ID: HRGMv2_4427_13_31
Type: pfam
Location: 27724 - 28638 (-)
Type: pfam
Location: 27724 - 28638 (-)
Gene ID: HRGMv2_4427_13_32
Type: TC
Location: 28660 - 29547 (-)
Type: TC
Location: 28660 - 29547 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
RGIG3926
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.