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Cluster: HRGMv2_4427_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_4427_13 HRGMv2_4427_13_17 14053 15393 - 3.A.5.1.1
STP HRGMv2_4427_13 HRGMv2_4427_13_18 15396 15704 - Sigma70_r4
CAZyme HRGMv2_4427_13 HRGMv2_4427_13_19 15854 16816 + GH130_7
NULL(UNKNOWN) HRGMv2_4427_13 HRGMv2_4427_13_20 16890 17126 - NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_4427_13 HRGMv2_4427_13_21 17286 18116 + LysR_substrate
TC HRGMv2_4427_13 HRGMv2_4427_13_22 18206 19081 + 3.A.1.7.5
TC HRGMv2_4427_13 HRGMv2_4427_13_23 19092 19967 + 3.A.1.7.5
TC HRGMv2_4427_13 HRGMv2_4427_13_24 19987 20739 + 3.A.1.7.5
Gene ID: HRGMv2_4427_13_17
Type: TC
Location: 14053 - 15393 (-)
Gene ID: HRGMv2_4427_13_18
Type: STP
Location: 15396 - 15704 (-)
Gene ID: HRGMv2_4427_13_19
Type: CAZyme
Location: 15854 - 16816 (+)
Gene ID: HRGMv2_4427_13_20
Type:
Location: 16890 - 17126 (-)
Gene ID: HRGMv2_4427_13_21
Type: STP
Location: 17286 - 18116 (+)
Gene ID: HRGMv2_4427_13_22
Type: TC
Location: 18206 - 19081 (+)
Gene ID: HRGMv2_4427_13_23
Type: TC
Location: 19092 - 19967 (+)
Gene ID: HRGMv2_4427_13_24
Type: TC
Location: 19987 - 20739 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Acutalibacteraceae
→
Genus
RGIG3926
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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