Cluster: HRGMv2_4427_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_4427
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_4427_9 | HRGMv2_4427_9_36 | 38268 | 39506 | + | GH29 |
| TC | HRGMv2_4427_9 | HRGMv2_4427_9_37 | 39519 | 41279 | + | 3.A.1.106.2 |
| pfam | HRGMv2_4427_9 | HRGMv2_4427_9_38 | 41296 | 41751 | - | dCMP_cyt_deam_1 | MafB19-deam |
| peptidase | HRGMv2_4427_9 | HRGMv2_4427_9_39 | 41768 | 42751 | - | G05.UPW |
| TC | HRGMv2_4427_9 | HRGMv2_4427_9_40 | 42880 | 44757 | - | 3.A.1.135.5 |
| TC | HRGMv2_4427_9 | HRGMv2_4427_9_41 | 44757 | 46487 | - | 3.A.1.135.5 |
Gene ID: HRGMv2_4427_9_36
Type: CAZyme
Location: 38268 - 39506 (+)
Type: CAZyme
Location: 38268 - 39506 (+)
Gene ID: HRGMv2_4427_9_37
Type: TC
Location: 39519 - 41279 (+)
Type: TC
Location: 39519 - 41279 (+)
Gene ID: HRGMv2_4427_9_38
Type: pfam
Location: 41296 - 41751 (-)
Type: pfam
Location: 41296 - 41751 (-)
Gene ID: HRGMv2_4427_9_39
Type: peptidase
Location: 41768 - 42751 (-)
Type: peptidase
Location: 41768 - 42751 (-)
Gene ID: HRGMv2_4427_9_40
Type: TC
Location: 42880 - 44757 (-)
Type: TC
Location: 42880 - 44757 (-)
Gene ID: HRGMv2_4427_9_41
Type: TC
Location: 44757 - 46487 (-)
Type: TC
Location: 44757 - 46487 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
RGIG3926
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.